Ticket #9 (closed question: fixed)

Opened 7 years ago

Last modified 6 years ago

MIxS checklists - general comments

Reported by: guest Owned by: pyilmaz
Priority: minor Component: MIxS general
Version: 2.2 Keywords:
Cc: Sensitive: no

Description

Just some comments and suggestions:

[1] In the checklists (eg. MIGS/MIMS), the description of column 1 includes that this is the "name of a checklist item as it will appear in GenBank? structured comments". Can this be reworded so that it is "...name of a checklist item that is used in GenBank? structured comments"? We often get these in the wrong format.

[2] Was it determined that the item "submitted_to_insdc" was not a required tag? We do not require this to be included in structured comments.

[3] Can "env_" be added to biome/feature/material, eg. env_biome, env_feature, env_material to make these more clear when they are listed in samples/structured comments?

thanks
Anji

Change History

comment:1 Changed 7 years ago by pyilmaz

  • Status changed from new to assigned

1 > Yes, good idea, thanks!
2 > I will talk to Renzo, and figure out what the final resolution on this. I also remember that this was not a required tag.
3 > Yes, I will add that

comment:2 Changed 6 years ago by pyilmaz

  • Status changed from assigned to closed
  • Resolution set to fixed

1> Changed the description in:

I will change the readme in spreadsheets once I put on updated files

3> Added 'env_' to these fields

2> submit_to_insdc is apparently still mandatory. However, it does not have to appear in sequence records. So, I will modify the description of the field to indicate that this is just a self-check field, and should not be included in submitted contextual data

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