Ticket #57 (new task)

Opened 5 years ago

Last modified 5 years ago

Create classes for MIxS sections

Reported by: pyilmaz Owned by: pyilmaz
Priority: major Component: MIxS general
Version: 4.0 Keywords: DwC
Cc: Sensitive: no

Description

Create investigation, environment, nucleic acid sequence source, and sequencing classes that correspond to MIxS sections.
http://gensc.org/ns/mixs/Investigation
http://gensc.org/ns/mixs/Environment
http://gensc.org/ns/mixs/NucleicAcidSequenceSource
http://gensc.org/ns/mixs/Sequencing

Change History

comment:1 Changed 5 years ago by pyilmaz

  • Keywords DwC added

comment:2 Changed 5 years ago by pyilmaz

  • Version changed from 3.0 to 4.0

comment:3 Changed 5 years ago by pyilmaz

  • Owner changed from pyilmaz, tuco to pyilmaz

Attempts to define the MIxS sections:

Investigation: category of information which describe a self-contained unit of scientific enquiry, with a holistic hypothesis or objective and a design that is defined by the relationships between one or more 'Studies' and 'Assays'. A Study represents the part of an experiment containing information about the biological material, and an Assay is the part using particular technologies that produce data

Environment: category of information describing the origin of the sequence in terms of habitat, location, date/time of sampling, as well as properties of that environment with measurements. This section is part of 'Study'

Nucleic acid sequence source: category of information describing the origin of the sequence in terms of the biological material that it was obtained from. This section is part of 'Study'

Sequencing: category of information describing the sequence processing methods used in the investigation, and is part of the 'Assay'

Last edited 5 years ago by pyilmaz (previous) (diff)
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